rs33132836 SNP Detail

Summary

• ID
  rs33132836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:41338628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT TGGTTGTAAG CCCATGACTC
  R
  CTTAACTGAG TGTGTGGGAA TGCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46238630	mCV24416915	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss144674303	ENSMUSSNP2134222	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss322633439	CHEV_8_41970945	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33132836					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:41338628 () rs orientation: forward

Symbol	Name	Function Class
Rr662620	regulatory region 662620	1405 bp proximal
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	within coordinates
Tssr76991	transcription start site region 76991	926 bp downstream
Tssr76992	transcription start site region 76992	752 bp downstream
Tssr76993	transcription start site region 76993	9 bp upstream
Tssr76994	transcription start site region 76994	1024 bp upstream
Tssr81068	transcription start site region 81068	1508 bp downstream