rs33134341 SNP Detail

Summary

• ID
  rs33134341
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95591507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCCAGACC TTGGAGTTTC
  AGCTGAGTGA GAACGGGGTT CAGGGGGCTG CATGTGAGGG CCGTGCTTTT CAGAGGCCAG
  CTCTGTGCTT GGAGGCTGAG ATGGAACCAT CCCTTCCCCT GTAGAAGAGT TCTTGGGTTG
  CCCGGGTCTG TGAGGATGCC TGCGGCTCCG GTGCAGAGGC AAGGCAAAAG GCACTCTCCC
  R
  TAACCGAACA TCCCTGGCTT GATGGGGTCT CGAACCCGGA ACCTAGGAGG ATGTGTAGAC
  TTAGTCATCT CTTAGCCTGT CTCCGTAGTC TGCTTCCTGA AAGATTGGCC TGCTGAAGCG
  CCTTTCCATT ACCCCCTGTT CTGCTCTGCC CTCAGAGCCT CACCTCTGGG CCCCTTGAGG
  CTCCTGGGTT TCCTCTCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46776245	NES10748007	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33134341					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46776245	NES10748007	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95591507 () rs orientation: forward

Symbol	Name	Function Class
Adamtsl4	ADAMTS-like 4	within coordinates
Gm65708	predicted gene, 65708	1484 bp downstream
Rr581015	regulatory region 581015	1104 bp distal
Tssr34517	transcription start site region 34517	328 bp downstream
Tssr34518	transcription start site region 34518	1392 bp downstream