rs33134805 SNP Detail

Summary

• ID
  rs33134805
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95539803 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTGGCTT CTGCCTGTCC
  TTTATAGCTA ATTCAAAAGA TATGTCACCT TATAGAAAAT GAGAGATTTG GGAACTTGGT
  TAAATGGTGT GCTAACACCC AAAGCTTAGT CCAGACTCAG CAAGAATGGG GCCCCTTTTC
  ATTCTTTTTC CCTTCAGTTT CTATTCCTAA GTTCTGTTTG TGTGGGAGAA GTGTGAGTTA
  Y
  TAGTAATAAG CAAAAGAAAC TGGCCTTTCT GTCCCTGGCC CCACATCATA CCCTCCCCTG
  TCTTCCTGAC ACCCTGCCTC TGAAAACCGT TTGGAGGGAA ATGCAGGAGA CAGAGCTGAC
  TGAAATGTCC AGTCTTCTGG GGTGGGGTCA GCTCTATGTC GAGAAGAAGT CTGCTCTCAG
  TGTCTTAGTC AAAAGCGTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46775888	NES10750028	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33134805					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46775888	NES10750028	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95539803 () rs orientation: forward

Symbol	Name	Function Class
Ensa	endosulfine alpha	390 bp downstream
Rr69362	regulatory region 69362	198 bp proximal
Rr73413	regulatory region 73413	1198 bp proximal
Rr82135	regulatory region 82135	within coordinates