rs33134810 SNP Detail

Summary

• ID
  rs33134810
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95540143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTGGGGTC AGCTCTATGT
  CGAGAAGAAG TCTGCTCTCA GTGTCTTAGT CAAAAGCGTC CCAGGTGAAT TTATAACTGT
  TTAAGATGCT TCTGACTTTC TTCTCATTTA GCCAGGGGCT TGTGATACAT CTCAATAGTT
  TGTCCTGCTG AGCGGTGAGC CCAGTGGGAT GAGAGCCCAT TAAAAAGTGT GCTGGGCTGG
  R
  CGAGCTGACA TGCATGCCTT GGGAAGTGGA AGCAGGGGAG CAGGAGCTGA AGGTCATCAT
  CAGCTGCATA AACACGAAAC CCGAGATAGG GAAGTGCTTG CTCCTAAGCC CTGAACTTCA
  GAAATAGAGG CAGAGAATTA AATGGTCAAG GCTCTGTGGT ACAGCTCCAT CTCAAAAAAA
  AATTGGTTGG TTAAGGGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46775894	NES10750033	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33134810					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46775894	NES10750033	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95540143 () rs orientation: forward

Symbol	Name	Function Class
Ensa	endosulfine alpha	730 bp downstream
Rr69362	regulatory region 69362	within coordinates
Rr73413	regulatory region 73413	858 bp proximal
Rr82135	regulatory region 82135	within coordinates
Rr82136	regulatory region 82136	1859 bp proximal