rs33136647 SNP Detail

Summary

• ID
  rs33136647
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95542846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGATGGAA CACAAATACA
  GTGCAAAACA ATACAGTGCA CATGCATGTG TACAGGGAAA ACACGTATAC ACATAAAAAG
  GGATGGGGAT ACAGGCATTG TAATACATAC TTGTAATCCC AGCAATTGGG AGGCTCAGGC
  AGGAGGATTG AAAATTCCAA ACAAGCTACA CCATAGCAAG ACTGTCTCAG AAAACGAACC
  R
  CATGTGGAGG CAAATGTATG TATCCTAGCA CACAAATGCA GGAGAATCAC ACATTTGAAA
  TCAGCTTGGT TTACATGTCT GGAGGGGGAG GGTTAGGGGG TATCAGTGAG GGGACTCAGC
  GTGACAGGAA ATGTGCATGA ACTCCAGTCA TGTGGGTCTG AGAACAGAGG GAGATGAACT
  CAGTTGACAG CAGAGGCAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46775915	NES10749875	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33136647					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46775915	NES10749875	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95542846 () rs orientation: forward

Symbol	Name	Function Class
Rr73413	regulatory region 73413	1046 bp distal
Rr73414	regulatory region 73414	1755 bp proximal
Rr82136	regulatory region 82136	within coordinates