rs33136770 SNP Detail

Summary

• ID
  rs33136770
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:90406654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATATAAGGG TCCTTCCAGC AAAATCTTGC TGGCATATGC
  AATAGTGTCT GCAGAGAAGG TGTTTCATAT CATGTCATTA GTGAAATAAT TTAAACATAA
  R
  GAACAAAAGG ATATTACCAC ATGCACATCA GAATAGTTAA TATAGAACAC TGAAAGAACA
  AATGTTGACA ATCATGTGGA ACAAAGTTCT TATTTCTTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39499236	mCV23555096	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G	A
ss146208348	ENSMUSSNP7145353	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss325509257	CHEV_17_90498566	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33136770					SNP	G	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:90406654 () rs orientation: forward

Symbol	Name	Function Class
Nrxn1	neurexin I	within coordinates
Rr336618	regulatory region 336618	1147 bp proximal