rs33137436 SNP Detail

Summary

• ID
  rs33137436
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:55495269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CATGAGGAAG GTGTAGGAGA TGGACCATGC AAAAAAGTCA AGGAGGAAGA GAAATTCTTT
  CAACATGTAG GTGCAAGGGG TAAGTGGCCC AGGAGGGGTG CCCACCAGGG TTCAGGGCAG
  CAAAGATAAA ATATAGATTG TAGATTAGTG TTAACCCAGG AATATTGGAG GAGAATGTGT
  GTTAGCCACA TGGAGTTAGG GTATAGGCCA GCCATTGAGC TCTTTAGGGC ACATTAAAAA
  TGAGGCTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  W
  GAGAGAGAGA GAGAGAGAGA GACTTTCATT TGTGAATCCA AAACATTTGG GTGGATGTAC
  AGGAGAAGCA CACAGCATTT GGTGAGTTTA AAGTTGATTA GCAATTTATA GCATCAGATG
  GTGCTCAATG TTTTAGACTT GTACTCTTAA AACTTAGTTG GGGGTCCCAA ATGGAAAACA
  CACTGTGTGA CATGAGATTA GGAAGTGGGA AGAATAGGTT TCTCAGTGGA GTTGAGCTGA
  TTATCATGGT TCCTTTCCAG GCCATGCAGG TTCAGACAGA ATAATAGGCA CAAGCCTCCT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39499333	mCV25248151	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss39540489	mCV25248144	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33137436					SNP	T	?	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:55495269 () rs orientation: forward

Symbol	Name	Function Class
Rr392767	regulatory region 392767	709 bp downstream