rs33137647 SNP Detail

Summary

• ID
  rs33137647
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95616620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCATGTACA AAGGAGCTGC
  CCTCTGTGTA CCAGGTATAG ATTGTCTGAG GCAATGTGCC CTCCCTTATG TGTGAGGGGT
  GAAGCAGTAG TTCCTCTAAG GTTTCAATGT AAGAAAGAGA TGGGGCGTGG TCTGTGTTTG
  GTCCGGAAGA AGATTTGCGA TGTTGAGATG TGGGCAGGAT AGGAAAGTAA GTGTAGAGTC
  R
  GTCTGTAGTT CCACCTGGAG AGGAAGAGTC CTGGAGGGTA GAGAAGATAG TGGTAGCTGA
  CCAAAAATTA GTGTTTTGGA TTTGTAAATG AGTAACTGCT CAGCAGCAGG AAAGTCCACA
  TGCAGGATGC CTGTCCCTGG GTGGTCAATC TGTGCGCTAC AGGTGCAAGG GAGCATCCCA
  GTCAGTGGCC TTGGATCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46776377	NES10746866	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33137647					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46776377	NES10746866	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95616620 () rs orientation: forward

Symbol	Name	Function Class
D3Umi14	DNA segment, Chr 3, University of Michigan 14	1321 bp distal
Rr367486	regulatory region 367486	1610 bp downstream
Tssr34521	transcription start site region 34521	1387 bp downstream