rs33137805 SNP Detail

Summary

• ID
  rs33137805
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11262052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCATGGTCTT ACCTTGAAAT CCTGGAACTC CGGGCAGTCC CATATCTCCC TTTGAACCTG
  TGATCCCTGG AGAGCCGCCA ATGCCCTAGG TACCAAAGGA AGTGTGAGCT GGACATGGCT
  CTAGACACCC AGTTTGTACC CTGCGTACCC TGTCAGGCAA AAAGCACTTC TGTGTTCTGC
  ACAGGAGTTT GTGAGCTCAG GTGGGTCATA CAATTCTTTA AACGACAGAA CACGAGAAGA
  TAACTGCAAC ACTGGTCCCC TGGTCTCTCT TTACTGGTCC ATATACACAG CAGTTCCTTC
  R
  AGCTTGTAGC CGCTGTCCCC ACCCACCAGC ATGATGCCAT GACACAGCCA CAATACCATG
  GACAGTTGCC ATGGAAACAA ACCCAGTTCT ATCAGGACCA TACCACCCTT CTGGTCTCTT
  CATCGTCAAA GGGCAGTGAG TGTTCCTTAA AACCAGCCTC ATGCCCCATC TGAATTATTA
  TTTTAATTAT GGAGAAAATA TTTTAAAACA CCTGAGCCTC TGCCAACTCT AGAAGACAAT
  TCTCAGGCTG TGAAGAACTG CTCTTTACCA AGATACTGAA TACTTGCACT GAATTTGTAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46239044	mCV23753065	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148666908	ENSMUSSNP5773557	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33137805					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11262052 () rs orientation: forward

Symbol	Name	Function Class
Col4a1	collagen, type IV, alpha 1	within coordinates
Tssr80369	transcription start site region 80369	475 bp upstream