rs33138710 SNP Detail

Summary

• ID
  rs33138710
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95618355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGGAAGT TGAGCCTGTG
  ATTTCACCAA GGACTATATG ACATACCTCT ACAGTATGTA GGGATTGGGC TTCCCAGATA
  AGGTCAGGCG GAGGAGAGAA AGCCCCACTG AAAAAGAGAG TCCTCTCTTT TGTTCCAACA
  TCAGGAAGCT ATCTGGTCAT AGTAGACTGT GATCTCCATA GCAGGGCTTC CCAACAATAG
  K
  GGTGTTAAAG GAGGAAGATG GGACAAAGTT GTTTTTTCTT AAGAGGTCGG AGATGATAGG
  TTTAAGTTCC AGAAACTCTG GAGATAGTGG GTACTGAGCT TGGGTGATGT ACCAGGTAGG
  ATGGTACATG GTATTGGATG ATAATGGGGA ATGGTGTTCA GCAACTGAGG AATTTGGACA
  TCCCAGACTT GGGGGGTCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46776395	NES10746835	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	G	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33138710					SNP	T	T	T	T	T	G	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46776395	NES10746835	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95618355 () rs orientation: forward

Symbol	Name	Function Class
D3Umi15	DNA segment, Chr 3, University of Michigan 15	583 bp proximal
Tssr34521	transcription start site region 34521	345 bp upstream