rs33138806 SNP Detail

Summary

• ID
  rs33138806
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:64657719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCA GTGTTCACCT CTCTTGGCCT
  R
  GGGCATCTGG ACACTTTACC TGGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45742111	mCV24254926	ABI	CRAMUS_MOUSE	f	SNP		G	A	G
ss148571244	ENSMUSSNP1010947	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss321560894	CHEV_5_64891615	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33138806					SNP	A	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:64657719 () rs orientation: forward

Symbol	Name	Function Class
Gm43838	predicted gene 43838	within coordinates
Gm52815	predicted gene, 52815	within coordinates
Rr378042	regulatory region 378042	within coordinates
Rr612036	regulatory region 612036	1433 bp distal
Rr612037	regulatory region 612037	918 bp distal
Rr612038	regulatory region 612038	141 bp proximal