rs33140699 SNP Detail

Summary

• ID
  rs33140699
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:78718003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTACTCCTC AGGATCGCTG
  TGGATGATGG TGGCTGTGTT GTTTTGTTTA CCTTGTGGTT CCATATACAT TCTTGAATTG
  AGTTTTCTAG ACCCATCAAG TATGACTTCA GAATTTAGGT TGTATCACTC AGTCTATAGA
  TTACATTTTG TAGTAAAGCT AATTTCACAA TATTAATTCT GCTAGTTCAG GAGAATGAAA
  M
  GTTTTTTGTC ATCTAGTGTC ATCTTTGATT TTTCTTTTTC AGTGTCTTGA GGTTTTCATT
  GTAGAGGGCT CTTGCTTTGG CTAGGTATAT TTTCAGGTTC TCTTGCTTTG GCTAGGTATA
  TTTTCAGGTT CTCTTGCTTT GGCTAGGTAT ATTTTCAGGT TCTTTTCTTT TTGAGTTAAT
  GTGCATGAAA CACTTTTTAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45241672	mCV25372853	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C	C
ss146781753	ENSMUSSNP809599	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33140699					SNP	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:78718003 () rs orientation: forward

Symbol	Name	Function Class
Gm51431	predicted gene, 51431	1737 bp upstream
Ube2e3	ubiquitin-conjugating enzyme E2E 3	within coordinates