rs33141918 SNP Detail

Summary

• ID
  rs33141918
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28047244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGC CCTGAGGGGA GAACTGCAGC
  Y
  TCCCTATCCC TCTCTGCCAG GCCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39499388	mCV22518447	ABI	CRAMUS_MOUSE	f	SNP		T	C	T
ss145419824	ENSMUSSNP3018645	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325349862	CHEV_17_27965215	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33141918					SNP	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28047244 () rs orientation: forward

Symbol	Name	Function Class
Gm65125	predicted gene, 65125	1024 bp upstream
Rr405125	regulatory region 405125	1767 bp downstream
Rr405126	regulatory region 405126	712 bp downstream
Tssr147073	transcription start site region 147073	1312 bp upstream