rs33145285 SNP Detail

Summary

• ID
  rs33145285
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3647716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGCTGTC GAGAGCTCTG
  CCTACTCTCC TAGAGAACAC AGCCATATTT CCCAGAACCC ATGTCTGGTG GCTCACAACT
  ATCTGTAACT TTAGCTTCTG GAGGTCTGAC TGGTACCCAC CCTCTTCTGG CCTCTGAGGG
  CACTCGTATG GCACATGTGT GTGCACATGC GCGTACACAC ACACACACAG CCCTGGCTTG
  K
  ACCTATATGC CTGACTCTGT AGTTCCTAGT CCAGACCATT CCTTCTTTTC GATCATGTAC
  TTTGTAGAAG AGTGAGCAGA TGGGTTATGT GTTGATCTGA CCTGCTGTGC CCCTCCCCAA
  TGCAGAGCAT GTGCCTCCGG AGCTGTGGGA ACCCTTCTAC ACCGATCAGT ACGCACAGGA
  GCACGTGAAG CCCCCAGTGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46239951	mCV22853504	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss148546655	ENSMUSSNP3604473	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33145285					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3647716 () rs orientation: forward

Symbol	Name	Function Class
Camsap3	calmodulin regulated spectrin-associated protein family, member 3	within coordinates
Rr180906	regulatory region 180906	1516 bp distal
Rr189485	regulatory region 189485	685 bp proximal
Rr381636	regulatory region 381636	within coordinates
Tssr76064	transcription start site region 76064	1192 bp downstream
Tssr76065	transcription start site region 76065	599 bp upstream
Tssr76066	transcription start site region 76066	623 bp upstream
Tssr76067	transcription start site region 76067	638 bp upstream
Tssr76068	transcription start site region 76068	655 bp upstream
Tssr76069	transcription start site region 76069	727 bp upstream
Tssr76070	transcription start site region 76070	877 bp upstream
Tssr76071	transcription start site region 76071	926 bp upstream
Tssr76072	transcription start site region 76072	1805 bp upstream