rs33145902 SNP Detail

Summary

• ID
  rs33145902
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:83081094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCCTCCAG CTACAATAAG GAACTGCTAT CAAACTGGAA
  AACCAACACA TCGGCTTCCA AAACACATGG CCTCCATGGT CCCCCCTAAC AGAACCCTAC
  R
  GCTTTATGAA GCCACGCACT GACAGAACAG CAATGGAAAC AGAAAATAAA ATCAAAATGA
  AAACATAAAC AGCTGTTTCC CTTGCACCGT GGCAACACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46239879	mCV24054936	ABI	CRAMUS_MOUSE	f	SNP		G	A	G
ss145303283	ENSMUSSNP722764	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322735750	CHEV_8_84878364	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33145902					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83081094 () rs orientation: forward

Symbol	Name	Function Class
Il15	interleukin 15	within coordinates
Tssr81943	transcription start site region 81943	1043 bp upstream
Tssr81944	transcription start site region 81944	985 bp upstream
Tssr81945	transcription start site region 81945	934 bp upstream
Tssr81946	transcription start site region 81946	881 bp upstream
Tssr81947	transcription start site region 81947	118 bp upstream
Tssr81948	transcription start site region 81948	1700 bp downstream