rs33147369 SNP Detail

Summary

• ID
  rs33147369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118712644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTT GGGCCTCCCA ACCTTGGGCC
  R
  TCACAAATAG CGCCCAGGCC GTGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45243105	mCV22801889	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss320472440	CHEV_2_118707899	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33147369					SNP	G	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118712644 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12096	CpG island 12096	1111 bp proximal
Ivd	isovaleryl coenzyme A dehydrogenase	within coordinates
Rr397218	regulatory region 397218	699 bp upstream
Rr397219	regulatory region 397219	1373 bp upstream
Rr563358	regulatory region 563358	846 bp distal
Rr563359	regulatory region 563359	761 bp proximal
Rr563360	regulatory region 563360	1407 bp proximal