rs33155573 SNP Detail

Summary

• ID
  rs33155573
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:39535672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAAACTTT AGATGAGAAA
  ATTTGAATGT CAAAAGAAAC AAAGCTCTCC AAGGAAAAGA ACTGGAGTTA TAACAGGCAA
  ATCTGGCTTG TCAAAGAACA GTAGTAATTC AAACAAAAAC CCTGAGCATT GAATGTTAGT
  GTTTGCCTAA ACATCATGAC ATCCTTTAGT GACAGAGCAG AGGCATTGCT GTGTAGTTAG
  S
  AAAGGAGCCG AGAAAAGCTA AGCCCCATTG CTGCGTGTAG CTCAGTGGTA GATGCTCAAA
  ACACGGCTCT GAGTTCAATC TTTAGTATCA CGGAAATAAT GCAAAGCAAA GCTACACATT
  GTGTGACGAA AAGTCAGCAA TGTCATACCC TGGAACACTG AAAGTTAAGA ATTAATAACA
  AAAGCAAAAC ATTTGGGAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss47263377	NES11023157	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs33155573					SNP	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47263377	NES11023157	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:39535672 () rs orientation: forward

Symbol	Name	Function Class
Rr409882	regulatory region 409882	598 bp proximal
Rr409883	regulatory region 409883	1389 bp proximal