rs33155851 SNP Detail

Summary

• ID
  rs33155851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95996830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCCTGAGC CATTTTGCCT
  GCCCCAAACT GTTTTGCTAT CCAGCAACTG CCACAAGCAG GGAGTCACTC TTTGCTTTAG
  GTGACCCCAT TTCAACCAGA CTGAAGAAGA TCTGGAAACT TCAAGGTCAC ATAATCTATG
  GCCAGGGCAG CCTGGGTGAA TACTGGATGC TTCCAGGAGG CTGGGTAATG CTGGTTGCGC
  R
  CTCTACCAGA GGATCAACTT CAACAACTAC TACCCAGGTC ACTTTAGGAA AGTTGGTATG
  AGGCATTACC ACTTAACTGG TAACCTGACT AATCTGAGGA CGGTGGTCAG TCTGCAGACA
  TTGGTATGTG CCACCCAAAA AGGAGGCCAG TGCACTAACA CTTTGACTGT GGGATCTGAT
  GCTAAAAAAC AGACATGGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46779539	NES10726567	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33155851					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46779539	NES10726567	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95996830 () rs orientation: forward

Symbol	Name	Function Class
Rr397849	regulatory region 397849	666 bp upstream
Rr581141	regulatory region 581141	1979 bp distal
Rr581142	regulatory region 581142	669 bp proximal
Rr581143	regulatory region 581143	740 bp proximal
Rr581144	regulatory region 581144	1209 bp proximal
Rr581145	regulatory region 581145	1813 bp proximal