rs33156324 SNP Detail

Summary

• ID
  rs33156324
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147020359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAG GATCACTTGG AGGCCATATT
  R
  CATGCTGGCC AAAAGATGGT TTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45243635	mCV22637844	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss147881236	ENSMUSSNP533879	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320548173	CHEV_2_147004175	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs33156324					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147020359 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12376	CpG island 12376	within coordinates
Cpgi12377	CpG island 12377	203 bp proximal
Nkx2-2	NK2 homeobox 2	within coordinates
Rr406682	regulatory region 406682	1851 bp proximal