rs33156512 SNP Detail

Summary

• ID
  rs33156512
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:39535858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGTGTAG TTAGCAAAGG
  AGCCGAGAAA AGCTAAGCCC CATTGCTGCG TGTAGCTCAG TGGTAGATGC TCAAAACACG
  GCTCTGAGTT CAATCTTTAG TATCACGGAA ATAATGCAAA GCAAAGCTAC ACATTGTGTG
  ACGAAAAGTC AGCAATGTCA TACCCTGGAA CACTGAAAGT TAAGAATTAA TAACAAAAGC
  R
  AAACATTTGG GAACAGATTA TTGTTTCCCT GCCTCTCAGC CAAAATCAAG TAGAAAAGTA
  GAAATGGGAA ACAGACAAAA GAAATTAAAA CAGCTTGCCT CTGGGCACAG GCCCTAGGAC
  AAGATGCTCT AACTTTTTGT TAAAAGTCTG AAGAATGATG AGCAAGCAAT GGTGGCTCAT
  ACGTGTGAGA CCAGCATGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	MOLF/EiJ
ss47263386	NES11023130	PERLEGEN	MM_PANEL2	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	MOLF/EiJ
rs33156512					SNP	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47263386	NES11023130	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:39535858 () rs orientation: forward

Symbol	Name	Function Class
Rr409882	regulatory region 409882	412 bp proximal
Rr409883	regulatory region 409883	1203 bp proximal