rs33159818 SNP Detail

Summary

• ID
  rs33159818
• Variation Type
  SNP
• Alleles
  A/C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:89740522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG AGCAGTCAGT GCTCTTAACC
  V
  CTGAGCCATC TCTCCAGCCT TAAAA                                      
  
  V = A/C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46240974	mCV24231566	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	G
ss145495097	ENSMUSSNP523525	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss322769788	CHEV_8_91537793	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33159818					SNP	C	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:89740522 () rs orientation: forward

Symbol	Name	Function Class
Rr366841	regulatory region 366841	within coordinates
Rr667276	regulatory region 667276	328 bp distal
Rr667277	regulatory region 667277	1516 bp proximal
Tssr78677	transcription start site region 78677	1239 bp downstream
Tssr78678	transcription start site region 78678	1954 bp upstream
Tssr82374	transcription start site region 82374	1431 bp upstream
Tssr82375	transcription start site region 82375	1721 bp downstream
Tssr82376	transcription start site region 82376	1756 bp downstream
Tssr82377	transcription start site region 82377	1774 bp downstream