rs33161419 SNP Detail

Summary

• ID
  rs33161419
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120550870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAT ATACATAAAT CTAACTACTC
  M
  CCCACCCACC CACCAGCAAA AACTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45244345	mCV25281057	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss147367307	ENSMUSSNP2159362	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss320479603	CHEV_2_120546125	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33161419					SNP	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120550870 () rs orientation: forward

Symbol	Name	Function Class
Cdan1	codanin 1	within coordinates
Rr37786	regulatory region 37786	1131 bp proximal
Rr58016	regulatory region 58016	1932 bp proximal
Stard9	StAR related lipid transfer domain containing 9	within coordinates