rs33161925 SNP Detail

Summary

• ID
  rs33161925
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26756881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTTCCAGGT CCTGGTCTCA GGTCACACTC TGAACCATTT AAACAAAGAT AGGAGACTCT
  ACCTCTAACT GCTTGGGCAG ATGGGGGATT CACACAACAA AGATACTGCC AGAGTTATTT
  AAGTCCATCA CTGTTGCTTG CTCCCTTTGA ATAGTTGTTA CCAGGGTTCC TCTTGCTCAC
  ATGCAGAATT AGGACTTTCC TTATAAGTGG ACAGGGAACT TAATGACAGA CCAGGACTTA
  CTGATCATTG GGACTCTTGT GCTGCCCCTT AGAGACATAT ACTCTGATAT AAGGATGGGA
  M
  TGACTGTATG TCCGGGTTGT CTCCTTTTGT TATGGGAATT GAGCCCAGCT GGAGGTCAAT
  CTTGGTGAAT AAAACATTAG CATAAACTCT CAGCAACCCT AAACTTCAAT TCTGCTACAC
  AATTTTCTTT CTGACAGATT CTAACAACCC TGATTAGTAC AGGGCTATCT TCCAGTCATA
  TTGGAAGCAG TGCTCCTTTA GCTAAATTCT GGTTTGGGTA ATTTATTATT TCCTAAGCAA
  ATTAGTAAAT CCCTTATACT TACGCCAGTA CAAAGTCTTT AAGATACACA GTTTCCAACA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39502331	mCV22900498	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33161925					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26756881 () rs orientation: forward

Symbol	Name	Function Class
Gm34606	predicted gene, 34606	1543 bp downstream
Gm50275	predicted gene, 50275	within coordinates
Rr405114	regulatory region 405114	143 bp upstream
Tssr143246	transcription start site region 143246	423 bp upstream