rs33162269 SNP Detail

Summary

• ID
  rs33162269
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126561061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACTAGTATT CTCTGGGTTT TATTTTATTC CAGTTTGATA
  GAATCTTTAA CTTAATGATT GATTTTGTGT GGTTTTACTT GTTTGGGCTT ACATCTAAGG
  M
  ACATGTAGAA AGTGTGTCTT TCCAGGAGAG GTTCCAAACT CTCATGGTCC AGTGGTCCAC
  TGATTCGAAT ACTTGCTGGA AATATAAATT TGCTAAGAA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45244166	mCV23899129	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss147510312	ENSMUSSNP3917011	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33162269					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126561061 () rs orientation: forward

Symbol	Name	Function Class
Tssr19969	transcription start site region 19969	1083 bp downstream
Usp8	ubiquitin specific peptidase 8	within coordinates