rs33164562 SNP Detail

Summary

• ID
  rs33164562
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:65140721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAACTTTCCT CATCAAAACA CTCCCCTGTT TCGTGGTCTC
  GGAATCACAC TCATGTTTAG TAAGCGCATG TAATAAGTAA GAAGTGGCTA CATAAGTCAC
  Y
  GTGCTAGTCA CTTATGAACG TCAATCACAC AAAAGGTAAA GGCGTGCACC CCCTCCTGAG
  GAGCATCCCT TATGAGGCAC TTTGTTGGAG AATTACAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46242336	mCV24592468	ABI	CRAMUS_MOUSE	f	SNP	T	T	C			T
ss60622516	NES16302489	PERLEGEN	MM_PANEL2	f	SNP	T			C	C		C	T	C		C	C	T	C
ss322682815	CHEV_8_67166484	CHEVERUD	SCREENING_POP	f	SNP										T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs33164562					SNP	T	T	C	C	C	T	C	T	C	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60622516	NES16302489	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:65140721 () rs orientation: forward

Symbol	Name	Function Class
Cpe	carboxypeptidase E	within coordinates
Rr664168	regulatory region 664168	437 bp proximal
Rr664169	regulatory region 664169	1096 bp proximal
Tssr81419	transcription start site region 81419	1790 bp downstream