rs33168888 SNP Detail

Summary

• ID
  rs33168888
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26487143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCA GCCTTGGCTA CATAGTAAGT
  Y
  TGATGCCAGT CTGGGCTGTC TACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39502312	mCV25263426	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145398347	ENSMUSSNP2689805	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33168888					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26487143 () rs orientation: forward

Symbol	Name	Function Class
Gm16580	predicted gene 16580	1168 bp upstream
Gm50013	predicted gene, 50013	within coordinates
Luc7l	Luc7-like	within coordinates
Rr329962	regulatory region 329962	658 bp proximal
Rr337090	regulatory region 337090	654 bp proximal