rs33169064 SNP Detail

Summary

• ID
  rs33169064
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88198593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCA TTCTGGGTGC TGCAAAAGAA
  Y
  GGGGAACTCA CCTGGTCGAA GTAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46242776	mCV24213080	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33169064					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88198593 () rs orientation: forward

Symbol	Name	Function Class
Cbln1	cerebellin 1 precursor protein	within coordinates
Cbln1os	cerebellin 1 precursor protein opposite strand	847 bp upstream
Cpgi20771	CpG island 20771	697 bp distal
Cpgi20772	CpG island 20772	within coordinates
Rr666962	regulatory region 666962	411 bp proximal
Rr666963	regulatory region 666963	536 bp proximal
Rr666964	regulatory region 666964	989 bp proximal
Rr666965	regulatory region 666965	1075 bp proximal
Rr666966	regulatory region 666966	1363 bp proximal
Tssr2634	transcription start site region 2634	561 bp downstream
Tssr78595	transcription start site region 78595	806 bp upstream
Tssr78596	transcription start site region 78596	818 bp upstream
Tssr78597	transcription start site region 78597	840 bp upstream
Tssr78598	transcription start site region 78598	873 bp upstream
Tssr78599	transcription start site region 78599	901 bp upstream
Tssr78600	transcription start site region 78600	924 bp upstream
Tssr78601	transcription start site region 78601	931 bp upstream
Tssr78602	transcription start site region 78602	1188 bp upstream
Tssr78603	transcription start site region 78603	1285 bp upstream
Tssr78604	transcription start site region 78604	1414 bp upstream
Tssr78605	transcription start site region 78605	1442 bp upstream
Tssr82309	transcription start site region 82309	1856 bp upstream
Tssr82310	transcription start site region 82310	1663 bp upstream
Tssr82311	transcription start site region 82311	1504 bp upstream
Tssr82312	transcription start site region 82312	1314 bp upstream
Tssr82313	transcription start site region 82313	1288 bp upstream
Tssr82314	transcription start site region 82314	156 bp downstream
Tssr82315	transcription start site region 82315	196 bp downstream
Tssr82316	transcription start site region 82316	235 bp downstream
Tssr82317	transcription start site region 82317	400 bp downstream
Tssr82318	transcription start site region 82318	578 bp downstream
Tssr82319	transcription start site region 82319	611 bp downstream
Tssr82320	transcription start site region 82320	638 bp downstream
Tssr82321	transcription start site region 82321	650 bp downstream