rs33171796 SNP Detail

Summary

• ID
  rs33171796
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:86002535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAATTAGA TAAAGAAATT ATCATATGAA ACCGTTCTGA
  GTTACTTAAA TATGTTAGTC AGAAAGAAAA ACAGGAACTG CAAATTGTTG TTTGCATAAT
  R
  TTTCCCAAAT TTGATGTCTA TCATACCATG ATATTTTCTC AAATTTGACT TTAACTTTTC
  AGAGAGAGAG AGAGAGAAAG AGAGAGAGAG AGAGAGAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45246390	mCV25235350	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss146850020	ENSMUSSNP1613908	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320376661	CHEV_2_86012348	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs33171796					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86002535 () rs orientation: forward

Symbol	Name	Function Class
Or8u9	olfactory receptor family 8 subfamily U member 9	376 bp upstream