rs33175470 SNP Detail

Summary

• ID
  rs33175470
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3809430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACAAAATC CAGCATCTTT
  ATTGAGCTAA AAAATGGACA GTGAGTGAAT TATTGTGCTA TGTTGATTCT GGAGAGCAAA
  ATGCTTTACA TTAGTACCTC CAAAGCTGGG ATGCAGTCTA TGGTCACCAG CATCTTACAG
  TTAATATTGG CCAGCTAGTC TTTAGGTCAT TGTTGTTGTA TAAGACTGCA CTAACCTGGC
  R
  CACTCTGTGT ATATTATTGC TACCTGGCCT CAATATGGTT AACATTGACA TTGGCATCTA
  TATTATAGGA TTCCATTTGT CATTAAAATA TCTTCTAGAA GGTTCTATAA TGATCCATTG
  TTGAAATGGA AATGAAGAAG TAAAAAATAT TCATCACTGG CAAACTGAAC ATAATATCTA
  TTTTCCTGTA ACAACCTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45246341	mCV24522146	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss146263089	ENSMUSSNP3441510	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs33175470					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3809430 () rs orientation: forward

Symbol	Name	Function Class
Gm13180	predicted gene 13180	within coordinates
Gm36031	predicted gene, 36031	within coordinates
Tssr15925	transcription start site region 15925	1802 bp upstream