rs33176291 SNP Detail

Summary

• ID
  rs33176291
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27719230 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGCTCACCCT CTGTCCCTGT CTGCTGTTTC AGTTCTTCTT
  CTTTTCAGTT ACTGGAGACA CCCGCTTGTT TCAGGAGTCA CTCTAGTTTG ACATGGCATC
  R
  TGTAGCTTGG GATGCTGAGG GCTTCTGGTT TCCATCTTCC TCCTGCACTG CCCAGTCCAC
  ACACCTTTCT CCTAGAAAAT TTCTAGAAAA GTCCCTTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46243469	mCV22300351	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss148886199	ENSMUSSNP645135	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33176291					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27719230 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	within coordinates
Cpgi20219	CpG island 20219	689 bp distal
Gm45470	predicted gene 45470	1619 bp upstream
Rr661483	regulatory region 661483	1827 bp distal
Rr661484	regulatory region 661484	1583 bp distal
Rr661485	regulatory region 661485	506 bp distal
Tssr80792	transcription start site region 80792	1658 bp upstream
Tssr80793	transcription start site region 80793	1161 bp upstream
Tssr80794	transcription start site region 80794	973 bp upstream
Tssr80795	transcription start site region 80795	683 bp upstream
Tssr80796	transcription start site region 80796	646 bp upstream
Tssr80797	transcription start site region 80797	615 bp upstream
Tssr80798	transcription start site region 80798	1603 bp downstream