rs33176782 SNP Detail

Summary

• ID
  rs33176782
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:148492824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTG AGACAGGGTT TCTCTGTATA
  R
  CCCTGGCTCT CCTGGAACTC ACTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45745868	mCV22903087	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss144691630	ENSMUSSNP3935748	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33176782					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:148492824 () rs orientation: forward

Symbol	Name	Function Class
Gm72666	predicted gene, 72666	within coordinates
Rr378792	regulatory region 378792	416 bp downstream
Rr378793	regulatory region 378793	374 bp upstream
Rr625198	regulatory region 625198	1859 bp distal
Rr625199	regulatory region 625199	616 bp distal
Rr625200	regulatory region 625200	520 bp proximal
Tssr54579	transcription start site region 54579	1989 bp upstream