rs33178439 SNP Detail

Summary

• ID
  rs33178439
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:83825824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGCCCAGG AGAGGTATTG CTGGATCTTC CAGTAGTACT
  ATGTCCAATT TTCTGAGGAA CTGCCAGACT GATTTCCAGA GTGGTTGTAC AAGCTTGCAA
  K
  CCCACCAACA ATGTAGGAGC GTTCCTCTTT CTCCACATCC TCTCCAGCAT CTGCTGTCAC
  CTGAATTTTT CATCTTAGCC ATTCTGACTG GTGTGAGTT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45246992	mCV25112983	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33178439					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:83825824 () rs orientation: forward

Symbol	Name	Function Class
Rr367220	regulatory region 367220	1226 bp downstream
Rr397089	regulatory region 397089	1957 bp downstream
Rr560211	regulatory region 560211	1071 bp distal