rs33184662 SNP Detail

Summary

• ID
  rs33184662
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127572223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTAGTATTG TTCTCTGGGC
  ATTATGTAAG GGCTTCAGTT TGTGGCCAGT AGTGTTTCTT TGTATATTCA TTCATTCATT
  CATTCCTATT ATGTTTTTGT GAGAACTTGG GAGCCAAAAA ATCTCATTTA TAGCTCTTGA
  GTAGAGATTT GGGTATTGGT GTATTTATTT CCAAAGAAAA AGAATATACA CAGATACATA
  K
  GGATTGAAGT CATTGTTATC TCAGGCAAGA AACTTGGGAG TAAAGACTTG TTTGCAGGGG
  AAACCTATTC TATTCCTGGG AAATATTAGG GAAACTTGTT CTGTGTATTC CCATGTGTCT
  TCCAAGGGAG TTGGTAATGG CTAACTTGAC CTCAGCTTCT AGGAATTGGC TATTTACTCA
  TCTATATTCT GTAGTTACTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47266807	NES11556378	PERLEGEN	MM_PANEL2	f	SNP	G	T	T	T	G	T	T	T	T	G	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33184662					SNP	G	T	T	T	G	T	T	T	T	G	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47266807	NES11556378	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127572223 () rs orientation: forward

Symbol	Name	Function Class
Fus	fused in sarcoma	within coordinates
Tssr69327	transcription start site region 69327	1940 bp downstream
Tssr69328	transcription start site region 69328	1241 bp downstream
Tssr69329	transcription start site region 69329	574 bp upstream
Tssr69330	transcription start site region 69330	1342 bp upstream