rs33185857 SNP Detail

Summary

• ID
  rs33185857
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:36828835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAGT AAAAAAGTAT TTTTGGCACC
  K
  GGGGAGATGC TCAGTGGAAA AAGCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45747276	mCV23283559	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33185857					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:36828835 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D5Ertd579e	DNA segment, Chr 5, ERATO Doi 579, expressed			Intron
				mRNA-UTR
Gm25767	predicted gene, 25767			167 bp upstream
Rr610244	regulatory region 610244			1528 bp distal
Rr610245	regulatory region 610245			211 bp proximal