rs33189732 SNP Detail

Summary

• ID
  rs33189732
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6037081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTGATGCTCT CCCTCGGACT CTCTGGGCAT GAAAGATACA GGCAGAATCA GTGTGATGGG
  AATCCTGCTG CTGTATCTCT GCAACGCCTG TCTTTTAAGG CTTTGGTTCA AGAAGTTCCC
  TGTGGAGCCA CGTCAGTTTC CCAGGCAGAC ACAGACACAA ACACAGACAC ACACACAGAC
  ACACACAGAC ACACAGACAT AAAGACACAG ACACAGACAC ACAGACACAG ACATAAAGAC
  ACAGACACAC AGACATAAAG ATACAGACAC ACACACACAC ACACACACAC ACACACACAC
  R
  CAGACATGGA GGCTTGTTTC TGCCCTTCCT TGGTACCTGC CTAGCTGCAA TTGCCCGCAG
  GAACCAGTAA AGGTTCCCGT GGTAGGCTAA GGGTCCTTTC TGTAGGGCTT CAGCTCCCTG
  TTCTAAATGT ATCACTTCTG TTGATACATA AACCCTCATT ACATTCATCC CCAGTCCCTG
  CCTTAACATT CTCCTGGGTC CTCTTCCGTT TATGTGGCTA GGTTTTGGAC ACTGAAATCC
  CTGTTGCGAT GCATGCTCTA ACAGAGCAGG TGGGCACGGG CTCTGAGACT CCTGCATTTC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39505640	mCV22974472	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33189732					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6037081 () rs orientation: forward

Symbol	Name	Function Class
Gm35525	predicted gene, 35525	697 bp downstream
Rr521274	regulatory region 521274	1773 bp distal
Synj2	synaptojanin 2	within coordinates
Tssr146309	transcription start site region 146309	1385 bp downstream