rs33191630 SNP Detail

Summary

• ID
  rs33191630
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100181757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTTCCTT ATACAAAGAA
  GGATCTTTTG ATGAGTGGGT CTTAAAGGCT TGACCTATTT GTTTCAGCAG TATGGTCCCC
  ATGCCTTCCC GGGATGACTG AACTCTCTGA CAAGAAGCTA AGACTCACAG ATGCGTTGTT
  TCCAAGAATC TCCTCCACCT CTAAGGGTGT ACCATGTCCT CACATCCTTA ATCAAGGACC
  R
  CTGCCACCTC TTACTGAAGG GGACAAACAA GGGGAGAGGA GAGATTGTGG CATTTACTAA
  GAACTCATAA CGTGGCTTCA CACATATTTA TTTGCTGTCT TCACCCCAGA TCCAGGCTTA
  CATAGTCAAA GTGATACAAT TATTACCATT TTTCCCATTG ATCCATCTTC CAAAGTAGGA
  CACCAAGTCA CAGGGCTTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47767870	NES11275981	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		A	G	A	A		G
ss323141702	CHEV_9_100200123	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33191630					SNP	G	G	G	G	G	G	G	G	G	G	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47767870	NES11275981	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100181757 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	1913 bp proximal