rs33191631 SNP Detail

Summary

• ID
  rs33191631
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100181798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAGGCTT GACCTATTTG
  TTTCAGCAGT ATGGTCCCCA TGCCTTCCCG GGATGACTGA ACTCTCTGAC AAGAAGCTAA
  GACTCACAGA TGCGTTGTTT CCAAGAATCT CCTCCACCTC TAAGGGTGTA CCATGTCCTC
  ACATCCTTAA TCAAGGACCG CTGCCACCTC TTACTGAAGG GGACAAACAA GGGGAGAGGA
  R
  AGATTGTGGC ATTTACTAAG AACTCATAAC GTGGCTTCAC ACATATTTAT TTGCTGTCTT
  CACCCCAGAT CCAGGCTTAC ATAGTCAAAG TGATACAATT ATTACCATTT TTCCCATTGA
  TCCATCTTCC AAAGTAGGAC ACCAAGTCAC AGGGCTTAGG AGCGCGGAGC CTCTAATCCA
  ACCCGGTCTG CTTCCAAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47767871	NES11275982	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		A	G	A	A		G
ss323141703	CHEV_9_100200164	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33191631					SNP	G	G	G	G	G	G	G	G	G	G	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47767871	NES11275982	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100181798 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	1872 bp proximal
Rr685480	regulatory region 685480	1998 bp proximal