rs33191633 SNP Detail

Summary

• ID
  rs33191633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100181989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGAGGAG AGATTGTGGC
  ATTTACTAAG AACTCATAAC GTGGCTTCAC ACATATTTAT TTGCTGTCTT CACCCCAGAT
  CCAGGCTTAC ATAGTCAAAG TGATACAATT ATTACCATTT TTCCCATTGA TCCATCTTCC
  AAAGTAGGAC ACCAAGTCAC AGGGCTTAGG AGCGCGGAGC CTCTAATCCA ACCCGGTCTG
  Y
  TTCCAAAGCC CACGCTCTCA ATAACACCCC ACGTGCCTGT CTGAGGCTGA GCTAAACAGT
  TAAGTTGGGG AAAATAAAAG CGGTCAGGCT TGATTCTGCT ATCTTGAACA CAAATATCTT
  GGCGTCACGG ACACACAAGC ACCATCTGCC TGTAGGTGTG CCGATGGTGG GAGCCACTCT
  ATCTGATGCA AAATTGAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47767873	NES11275984	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33191633					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47767873	NES11275984	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100181989 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	1681 bp proximal
Rr685480	regulatory region 685480	1807 bp proximal