rs33192413 SNP Detail

Summary

• ID
  rs33192413
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100183783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATTCCCAG CGTATTGATT
  TTTCTGCCGT GTTTTTCATC ACCATACGCC ATCATCGCCT GATGCATGCC TGCAAGCTTT
  GTTAAGTTCT ACCAAGCGAG CATTAAAGGA ACAAGACAAC AGACTCCAAA AACCACTCGG
  TGCAAGTTTG GATGGCCTTA AAAGGCCCAC GGAAACTAAA GGAAACCAGA GGAAAACCAG
  R
  TTGACAGCTG AGGTGGCGCC CCCATGTGGC CACAGCTGGA ACACATTTTT TTTTTTTTTT
  ACAATGTGTT CGTTGGGCAG TTTGCCAGGG GTGTTCTGGT TTAATTACTG TCACGGCGTC
  TCACTTGAAG AAGCTGCATC ACTTATTTGC ATGTGTGTAC AAAATGAAAA TCTGTGTAAT
  GCAAAGCTGT GGGGTTTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47767885	NES11275999	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33192413					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47767885	NES11275999	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100183783 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	within coordinates
Rr685480	regulatory region 685480	13 bp proximal