rs33192466 SNP Detail

Summary

• ID
  rs33192466
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:98763181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGAAGGC TTAAGAATGC
  ATCCTGTTCT TCCAGTGGAT CTGCCTTAGA TCCTTAGCCT TCACAAGGCT TCTGATATCA
  CCTGTAACTC GAGTTCCAGG GATCTGATGC CCTGTTTTGG TCCCATAGGA ACCCATCACA
  CCACACACAC ACAGACATTC ATGCAGACAC AAAGTGAAAA TAAAATGACA TTTTACAGAA
  R
  TATTGAGACC GAGGGCCATG CTATCAGAAA GTATGTGAGC ACAGCAAATG TTTCAAAGCA
  GGAGACCCCA CCACCTCTTC TTTCATTATC ATTTTCCTAT GGGCTCCATA CTTTCCCAGG
  TACTGTACCT TTCAGATTGA CATCTAGGAT GGTCTGCCTG GGAATGACAC CTGTGACATC
  AATGACAGCA GCAGTGTGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46783658	NES10736994	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33192466					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46783658	NES10736994	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:98763181 () rs orientation: forward

Symbol	Name	Function Class
Gm65690	predicted gene, 65690	within coordinates
Hsd3b1	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	within coordinates
Rr1170	regulatory region 1170	235 bp distal
Tssr34711	transcription start site region 34711	201 bp downstream