rs33193066 SNP Detail

Summary

• ID
  rs33193066
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18091442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG AGTGCCTCTT ACTAGCTTGC
  Y
  GGCTTCCCAT GGCTTGATCA GCTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39505507	mCV22803362	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss145227480	ENSMUSSNP6334224	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325312331	CHEV_17_18008144	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33193066					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18091442 () rs orientation: forward

Symbol	Name	Function Class
Gm36907	predicted gene, 36907	659 bp downstream
Rr340653	regulatory region 340653	within coordinates
Tssr5021	transcription start site region 5021	30 bp downstream
Tssr5022	transcription start site region 5022	7 bp downstream
Tssr5023	transcription start site region 5023	514 bp downstream
Tssr142818	transcription start site region 142818	783 bp upstream