rs33194044 SNP Detail

Summary

• ID
  rs33194044
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:107363158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATGAGAAA GGGACCCACC AAGGTCAGAA ATCAACCAAA
  AGCAACCTAG CTGCTTCTAC CCAGTTAGGG TTGAAGTTGG GCTCGGAGTC AGCAACTGCC
  Y
  CCCAGAAAGC AGCAACAGTC TCCTTTTGAA GCATAAAATC ACAAGCAGAT CAATATTCAG
  GAGACAATGA AGAAGGAATT CATAAATTGA GGTTTAGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46245846	mCV23430371	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145732474	ENSMUSSNP407449	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss322825760	CHEV_8_109160426	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33194044					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:107363158 () rs orientation: forward

Symbol	Name	Function Class
Cdh1	cadherin 1	within coordinates
Tssr79254	transcription start site region 79254	231 bp downstream