rs33195721 SNP Detail

Summary

• ID
  rs33195721
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:76805464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGCG GTGTCCGGGC GGGGCGGGCG
  W
  GGGTCCGAGC GGCCAAGGCA AGCGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45748873	mCV25286735	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33195721					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:76805464 () rs orientation: forward

Symbol	Name	Function Class
A730089K16Rik	RIKEN cDNA A730089K16 gene	within coordinates
Cpgi15996	CpG island 15996	within coordinates
Cracd	capping protein inhibiting regulator of actin	mRNA-UTR
Gm10430	predicted gene 10430	66 bp upstream
Rr613608	regulatory region 613608	223 bp proximal
Rr613609	regulatory region 613609	724 bp proximal
Tssr46728	transcription start site region 46728	32 bp upstream
Tssr46729	transcription start site region 46729	56 bp upstream
Tssr46730	transcription start site region 46730	110 bp upstream
Tssr46731	transcription start site region 46731	136 bp upstream
Tssr51429	transcription start site region 51429	693 bp downstream
Tssr51430	transcription start site region 51430	720 bp downstream
Tssr51431	transcription start site region 51431	746 bp downstream