rs33196091 SNP Detail

Summary

• ID
  rs33196091
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88529837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCATACG TATCCTCTTG
  CCAAAACACA AGCATGCCAA TGTGGAGACA TTTTCTGAGA CAGCAGTGTG GCGCTTCCTC
  TACCCAGGTG CTCCAGGAAA GGAAGTAGCA CTGACAGAAA AGCTGCAGGG GGCTCACAAG
  CCAGGGGACT CCAGGGCCAG CAAGCCTTTA GTGGTGCCCC AGCTAAAAAT GCAGAGAGGC
  R
  TCAGGGATGC AAGCCAGAGA GGATAGGGTG AAGGCTATTA CTGTCCTGCC TTCAGACAGC
  ACAAGCCAAG CTGTGCCCAG ATCCCTACGG AAACCAACTC ACTGTTCGAC CAGCTGCTGC
  TCTCTCGCCC TCTCTGGTCT TAGTTTTGGC AACAGCTCAT CAGGGCTGAG TATCCTCCAA
  GCAGACGCTA GCAGGACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46246330	mCV24221124	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss145451881	ENSMUSSNP6190253	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33196091					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88529837 () rs orientation: forward

Symbol	Name	Function Class
Rr667021	regulatory region 667021	628 bp proximal
Rr667022	regulatory region 667022	1220 bp proximal
Tssr82324	transcription start site region 82324	1181 bp downstream
Tssr82325	transcription start site region 82325	1202 bp downstream
Zfp423	zinc finger protein 423	within coordinates