rs33196187 SNP Detail

Summary

• ID
  rs33196187
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49345895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAGCTCA GGTCTTCATA
  TATACAGACC CTGCTCGCAG AGATGTGAGA CATTCAAAAC AGGACGTGCT TTGCTCTTGT
  GTTGAGAGAC TAAATCCCCA GGGCCTCAGT TTTTGCAAAA CTCCATCCAA TGTGGTTCTG
  GGTTGATGGA ATTGACCGGC TGTTTTCACT AACAGAAGGA GCCAATGGTG AGACAGAGAG
  R
  AGCTGGGGTG GTGGTGCACA GAGAGAAGGG AAGGGTGAGG TCTTTGTAAT CTCATGACAG
  TCTTCCTGCC TCCTCTAGAC TTGGACAGAC TCAAGGATGG AGCCTCCATG CATACAGGGC
  ATCTGTTGGC AATCACATAC TCCCTGCTAG TGCCTCTCTG TGAGGGTGTC TGTCCTGTAG
  AGGGGACAGC AGGGCTCGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39505719	mCV23750481	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss145726101	ENSMUSSNP1104979	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33196187					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49345895 () rs orientation: forward

Symbol	Name	Function Class
Lrfn2	leucine rich repeat and fibronectin type III domain containing 2	within coordinates
Rr337874	regulatory region 337874	1183 bp distal