rs33196395 SNP Detail

Summary

• ID
  rs33196395
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142329352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACAC ACACACACAC
  ACACACACAC ACACACACAC ACACACAATA AGTTAAACAT TTCTGAATAA ATTCAATAAA
  AAATGTACAA GTTTGCATGC TCAAAATGCA TAATGTCACT AAAACAAAAT AAAGAAGACT
  TAGATAAGCT ATCTAAAAGC TTATATAACA AGAAGAAAGC TATTCTCTGT TTTCTGTGTG
  R
  AGGTATTATT ACAGCTTGGA TGGAAATACT CTCTAAATTG ATTAATAGAT TCAATGTAAT
  CACTTATTAA AACCACAGCT GGATATTTTT ACAAAAATTA ACAAACTAAC ACGCTGGGGA
  AAATATAAAA GATCCAAAAT AATCAAATCA AACAATAATC AAAAGAACTT AGAAAGATAA
  AAGACCAAAA TTAGATGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45248561	mCV22352588	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147732295	ENSMUSSNP2020478	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320531577	CHEV_2_142313168	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33196395					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142329352 () rs orientation: forward

Symbol	Name	Function Class
Rr566216	regulatory region 566216	1428 bp distal