AGATG CAAAAGTCAT AGATAGAAAT R CATGCTCCAT TACCAAGGAG TTTCA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss46246240 | mCV25306838 | ABI | CRAMUS_MOUSE | f | SNP | A | A | G | A | ||
ss144620660 | ENSMUSSNP583345 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | A | |||
ss322624619 | CHEV_8_40714087 | CHEVERUD | SCREENING_POP | f | SNP | A | A | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs33197219 | SNP | A | A | G | A | A | A |
Location: Chr8:40081774 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Msr1 | macrophage scavenger receptor 1 | within coordinates | ||||||
Tssr81026 | transcription start site region 81026 | 512 bp downstream | ||||||
Tssr81027 | transcription start site region 81027 | 615 bp downstream | ||||||
Tssr81028 | transcription start site region 81028 | 665 bp downstream | ||||||
Tssr81029 | transcription start site region 81029 | 784 bp downstream | ||||||
Tssr81030 | transcription start site region 81030 | 906 bp downstream | ||||||
Tssr81031 | transcription start site region 81031 | 1600 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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