rs33197619 SNP Detail

Summary

• ID
  rs33197619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84133193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTGTAGCA AACACCAACA CAAAGCAGCA GCAGCAGTCC
  AGTCCATTCG GCAATCACCA GTCACGAATC AGCAATGGCA GTTGGGTTTG GAAGAAGCCA
  Y
  GGGGTTCCAC CAGCCAATCA GCCCAAGTCC TCGGAAGCAG CAAGAAGCCA CAGGAATATC
  ACAAGTCCTT GGCTGAGTTA CTCTCTACAA AGTCATGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39506625	mCV22837375	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss146121759	ENSMUSSNP7006564	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33197619					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84133193 () rs orientation: forward

Symbol	Name	Function Class
Gm41637	predicted gene, 41637	within coordinates
Rr531870	regulatory region 531870	1635 bp distal
Rr531871	regulatory region 531871	1338 bp proximal
Rr531872	regulatory region 531872	1399 bp proximal
Tssr146010	transcription start site region 146010	1336 bp upstream