rs33199677 SNP Detail

Summary

• ID
  rs33199677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129444173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTA GTACCTCCTG CCCAGGGCAG
  R
  CACTTAGGCT GAGCACTGTG CAGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45249116	mCV24477433	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss320505107	CHEV_2_129427989	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33199677					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129444173 () rs orientation: forward

Symbol	Name	Function Class
Sirpa	signal-regulatory protein alpha	within coordinates
Tssr20144	transcription start site region 20144	711 bp downstream
Tssr20145	transcription start site region 20145	36 bp downstream
Tssr20146	transcription start site region 20146	1477 bp upstream