rs33201230 SNP Detail

Summary

• ID
  rs33201230
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:99651237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGT GGCTCGCAAA CAAATGGGTC
  R
  TAAAGAAAAA GCTATTTTTA CCCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45749829	mCV23856275	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss148918647	ENSMUSSNP3618110	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321625675	CHEV_5_99932397	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33201230					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:99651237 () rs orientation: forward

Symbol	Name	Function Class
A930011G23Rik	RIKEN cDNA A930011G23 gene	within coordinates
Gm35253	predicted gene, 35253	within coordinates
Gm73139	predicted gene, 73139	525 bp upstream
Rr615301	regulatory region 615301	866 bp proximal
Rr615302	regulatory region 615302	1304 bp proximal